Advanced & Experimental Pathology Informatics
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Applied Pathology Informatics
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Imaging Informatics in Pathology
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Breakfast |
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Fundamentals of Pathology Informatics Workshop
ST. GEORGE AB
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7:30-7:45 |
What is Pathology Informatics and Why should I care?
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7:45-8:30 |
Computer Basics - Bits to Networks
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8:30-9:15 |
Fundamentals of Databases
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9:15-10:00 |
Introduction to Laboratory Information Systems
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10:00-10:30 |
Break
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10:30-11:15 |
Digital Imaging and Telemicroscopy
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11:15-12:00 |
Bioinformatics: Practical Applications in Pathology
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Advanced API Workshop:
Advanced Tutorials in Contemporary AP-LIS Issues:
Workflow Optimization, Asset Tracking and Synoptic Reporting
ST. GEORGE CD
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1:00–1:45 |
Manageable Quality Measures in Anatomical Pathology
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1:45–2:15 |
An example of a fully deployed solution, rendered as middleware
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2:15–3:00 |
Real-time tracking issues and logistics analysis intrinsic to AP tracking
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3:00–3:30 |
Break
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3:30–4:15 |
Anatomic Pathology Information - Tracking and Routing at Massachusetts General Hospital
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4:15–5:00 |
Quality systems and Quality Measures in AP Tracking systems
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5:00–5:50 |
Break. Light hors d’oeuvre.
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5:50–6:40 |
Overview of Synoptic Reporting in Surgical Pathology
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6:40–7:00 |
Discussion panel. All faculty members
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HIMA Workshop
STAFFORDSHIRE
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1:00–1:45 |
Sequential Imaging Techniques for Multimodal Microscopy Imaging and Auto Fluorescence Removal
Dr. Ali Can View Presentation (File is over 135M and may take a while to load)
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1:45–2:15 |
Image Object Detection and Segmentation
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2:15–3:00 |
Feature Extraction in Histopathology Images
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3:00–3:20 |
Break
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3:30–4:15 |
Searching for a Few Good Features
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4:15–5:00 |
Manifold Learning and Object Classification
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5:00–5:50 |
Break. Light hors d’oeuvre.
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5:50–6:40 |
Visual Experience in Digital Pathology
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6:40–7:10 |
Cell-Based Quantification of Molecular Biomarkers in Histopathology Specimens by Multi-Spectral Imaging and Automated Analysis
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7:10-7:40 |
Computer-Assisted Histopathological Image Analysis for Whole-Slide Images
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7:40–8:10 |
Graph-based Features for Prognosis Prediction in Digital Pathology
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8:10–8:40 |
Endoscopic Mircoscopy: Bridging the Radiology-Pathology Divide
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8:40-9:00 |
Discussion Panel. All faculty members.
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| 7:00-7:30 | Breakfast | ||
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7:30–8:45 Scientific Sessions |
Session #1 - BIOREPOSITORIES Lyman Garniss - Using a Commercial LIS as the Gateway to an Enterprise Bio-Repository (View Presentation) Ashokkumar Patel - Integrated Informatics Systems for Clinical and Basic Research: Supporting the Ohio Brain Tumor Study (View Presentation - no sound) Mark Watson - Adoption and Use of caTissue in a Multi-Repository Academic Environment (View Presentation - no sound) David Foran - Data Ready: A Deployable Data Management and Integration System for Large-Scale Cancer Repositories and Intelligent Databases (View Presentation -no sound) Zachery von Menchhofen - Controlled Vocabluaries for Bio-Repositories - An Integrated, Simplified Approach: Keeping It's Structure Simple (KISS) Session #2 - LAB WORKFLOW John Sinard - Histology Asset Tracking: Hidden Practices and Their Consequences (View Presentation - ppt) John Sinard - Histology Asset Tracking Dashboard: Real-Time Monitoring and Dynamic Work Lists (View Presentation - no sound) Kavous Roumina - Development of a Web-Based System for Managing Requests for LIS Data Searches in a Distributed Laboratory Environment (View Presentation - ppt) Kavous Roumina - Capture, Analysis and Management of Patient Wait Times for Outpatient Phlebotomy (View Presentation- ppt) Michael Blechner - Lab Monitor: A Client Based Application for Distribution of Customizable Electonic Tracking Boards for Clinical Laboratories Session #3 - LAB WORKFLOW Gaurav Sharma - Reduction in Slide Label Mis-Identifications Due to Implementation of 2 Dimensional Bar Coding in the Anatomic Pathology Laboratory at a Tertiary Care Hospital (View Presentation - ppt) Philip Boyer - Gross Photography Workstations: Critical Evaluation and Decision Analysis in an Academic Medical Center Setting (View Presentation - ppt) Curtis Stratman - AP-LIS Integration in Support of Pathologists' Digital Workflow (View Presentation - ppt) Maura Bidinost - Usability: Critical to Successful Adoption of Digital Pathology for Routine Sign-Out (View Presentation -ppt) Gina Clarke - Whole Specimen Breast Histopathology Imaging for More Accurate Tumor Measurements Session #4 - IMAGING Maristela Onozato - Virtual Biopsy of Human Kidney Using Optical Coherence Tomography (View Presentation) Rushin Shojaii - 3D Histology Volume Reconstruction (View Presentation) Hideaki Haneishi - Three-Dimensional Imaging Synthesis From a Set of Two-Dimensional Serial Pathological Images (View Presentation) Fangru Lian - Surgical Pathology Quality Assurance Program Using Real-Time Telepathology (View Presentation) Sourabh Khire - Intial Results with ZPEG: The Z-Stack Image Encoder (View Presentation) Session #5 - DIAGNOSTIC IMAGE ANALYSIS Johan Lundin - A Texture Analysis Method for Identification of Tumor Stroma vs. Epithelium in Digitized Tumor Samples (View Presentation) Sharath Cholleti - Classification of Brain tumor Regions (View Presentation) David Martin - Automated Image Analysis for Detection of Breast Carcinoma Cells in Surgical Specimens (View Presentation) Frank Voelker - Quantitative Measurement of Fat and Muscle in Whole Section Histology Analysis (View Presentation) Xin Qi - Optimizing Specimen Preparation and Multi-Spectral Imaging Protocols to Accomodate Automated Assessment of Expression in Non-Hodgkin's Lymphoma (View Presentation) Session #6 - HUMAN INTERFACES FOR IMAGING Michael Riben - Optimizing Access to Digital Pathology Slides: Overcoming User Interface Limitations and the Case-Centric Paradigm Yinhai Wang - Multitouch and Microsoft Surface as an Interface to Pathology Virtual Slides Roy Lee - Evaluation and Optimization for Cytopathology in Whole Slide Imaging (View Presentation) Fusheng Wang - Developing Data Model Standards and Databases for Pathology Analytical Imaging Claudia Mello-Thoms - Analysis of Digital Slide Exploration Characteristics of Expert Pathologists |
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Monday Morning Breakout Sessions
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AP/CP LIS Integration
St. George AB |
The Future of Diagnostics
St. George CD |
Implementation and Validation
Staffordshire |
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9:00-9:40 |
Advantages and Integration of Multi-Vendor LIS Environment
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Informatics of Tissue Microarrays
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Integrated Diagnostics: The Perspective of a Radiologist
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9:40-10:20 |
Advantages of a Single Vendor AP/CP LIS
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Measuring and Communicating the Value of Diagnostic Tests
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Integrated Diagnostics: The Perspective of a Pathologist
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10:20-11:10 |
Break and Browse Exhibits
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11:10–11:50 |
A Blueprint for the LIS and Lab Data Architecture of the Future
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Training in Pathology Informatics: Lecture, Rotation, Fellowship and Beyond
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Deploying a Department or Enterprise-wide Image Server
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11:50-12:00 |
Track panelists:
Q and A
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Track panelists:
Q and A
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Track panelists:
Q and A
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12:00-1:00 |
Lunch Break
CAP Foundation Travel Awardee Luncheon
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Monday Plenary Sessions
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1:00-1:40 |
The Future Direction of Health Care Information Technology
Staffordshire
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1:40-2:20 |
Development of In-Vivo and Super-Resolution Imaging
Staffordshire
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| 2:20-2:30 |
Introduction to the Laboratory Information Digital Exchange (LIDDEX) Project
Staffordshire
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2:30-3:30 |
Break and Browse Exhibits
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Middleware
St. George AB |
Modeling In Pathology
St. George CD |
Integrated Imaging and Diagnosis
Staffordshire |
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3:30–4:15 |
The Modernization of IVD Connectivity
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A Systems Biology Model of Anemia Derived From Clinical Laboratory Data
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Implementation and Validation of Clinical WSI
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4:15-4:55 |
POCT: An IT Perspective
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Numerical and Population Models of Disease Progression, Interventions and Outcomes
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Implementation and Validation of Tele-pathology
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4:55-5:15 |
Track panelists:
Q and A
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Track panelists:
Q and A
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Track panelists:
Q and A
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Adjournment for the day
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5:30-7:30 |
Pathology Informatics 2010 OPENING RECEPTION
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| 7:00-7:30 | Breakfast | ||
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7:30–8:45 Scientific Sessions |
Session #1 - EDUCATION
Edward Klatt - Podcasting the 5-Minute University (View Presentation)
Richard Haspel - the Future Pathologist: A Curriculum in Genomics and Personalized Medicine for Pathology Residents (View Presentation)
David McClintock - Using an Open Source Content Management System in an Academic Pathology Department: A Model for Creating Easy-to-Maintain and Easy to Use Departmental Project Websites (View Presentation)
Yao Schmidt - An Internet-Based Neuropathology Curriculum: Objective-Focused Content in an ACGME Wrapper
Gregory Kotnis - "Fair Use" of Copyrighted Material in Graduate Medical Education Curricula: Opportunities and Risks (View Presentation)
Session #2 - LAB WORKFLOW
William Yong - A Protocol for Testing Tolerance of Radio Frequency Identification Tags to Procedures and Conditions Encountered in an Anatomic Pathology or Biorepository Laboratory
Peter Gershkovich - FSLink-Frozen Section Management Software with Real-Time Communication with the OR (View Presentation)
Peter Gershkovich - Concurrent Event Monitoring in Anatomic Pathology (View Presentation)
Michael Riben - Patient Safety Initiatives at the Grossing Bench: Design, Implementation and Experience with Bar-Code Driven Specimen-Block Reconciliation for Biosy Grossing
Li Xiong - De-Identifying Pathology Reports for Pathology Informatics (View Presentation)
Session #3 - DIAGNOSTIC INTERPRETATION
Fred Crowgey - Using Artificial Intelligence Software as a Clinical Decision Support Tool for Laboratory Results: First Increased Troponin - I Alert Project (View Presentation)
Glenn Edwards - Automated Patient-Specific Interpretative Reporting for Chronic Disease Management in the Clinical Laboratory (View Presentation)
Peter Higgins - Thiopurine Metabolites Indexed Assay Calculation as a Grid-Enabled Rules Engine Via the LIDDEx Consortium's Grid Services Architecture in Support of Inflammatory Bowel Disease (IBD) Management (View Presentation)
John Madden - Pre-Signout AJC Breast Cancer Checklist Protocol Decision Support (View Presentation)
Gaurav Sharma - A Preliminary Analysis of the Pathology Informatics Lecture
Session #4 - COLOR & COMPRESSION
Pinky Bautista - A Study on Color Standardization in Whole Slide Imaging (View Presentation)
Takeshi Otsuka - Color Standardization (View Presentation)
Anurag Sharma - The Effect of Compression Factor on Special Stains Whole Slide Images (View Presentation)
Saunya Williams - Compression Effects on Computer-Based Morphological Studies (View Presentation)
Danoush Hosseinzadeh - Selective Decoding for Digital Microscopy Images Using the Sedeen Viewer
Session #5 - EDU_IMAGING
Gaurav Sharma - Development of a Head and Neck Pathology Digital Slide Teaching Set for Trainee Education (View Presentation)
Nikita Orlov - Pathology and Pattern Recognition: Implementation, Challenges and Solutions (View Presentation)
Peter Hamilton - An On-line Virtual Learning Environment for Undergraduate Education in Pathology (Presentation Not Available)
Peter Hamilton - Application of Virtual Mircoscopy in the Teaching of Microscopic Anatomy (Presentation Not Available)
Peter Hamilton - An On-Line Diagnostic Simulation Platform for Training and Skill Acquisition in Pathology (Presentation Not Available)
Session #6 - TISSUE MICROARRAYS / BIOREPOSITORIES / IMAGING
Ian Hagemann - Automated Lymphocyte Counting in Tissue Microarrays (View Presentation)
Yinhai Wang - High Performance Computing for Tissue Microarray Analysis (View Presentation)
Jason Hipp - SIVQ-Assisted Computer-Aided Laser Capture Microdissesion - A Novel Tool for Morphogenomics and High-Throughput Expression Studies (View Presentation)
Waqas Amin - Development and Experience with Tissue Banking Tools to Support Cancer Research (View Presentation)
Robert Leif - Unification of CytometryML, DICOM and Flow Cytometry Standard (View Presentation)
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9:00–11:50 |
Tuesday Morning Breakout Sessions
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LIS and the Enterprise
St. George AB |
Molecular Pathology Informatics
St. George CD
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Imaging
Staffordshire |
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9:00-9:40 |
Considerations in Evaluating and Implementing Positive Patient ID Systems for Specimen Collection
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Barriers to Clinical Lab Interpretive Reporting
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Spectroscopy and Quantitative Microscopy in Pathology Imaging
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9:40-10:20 |
LIS, POE and Lab Formularies
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Informatics for the Molecular Diagnostics Lab
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Quantitative Histocytometry
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10:20-11:10 |
Break and Browse Exhibits
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11:10–11:50 |
The LIS and the EMR: Convergence and Conflict
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Informatics of Broad Cancer Genotyping
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Imaging in Cytology
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11:50-12:00 |
Track panelists:
Q and A
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Track panelists:
Q and A
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Track panelists:
Q and A
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12:00-1:00 |
Lunch Break
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Tuesday Plenary Sessions
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1:00-1:40 |
Staffordshire
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1:40-2:20 |
Staffordshire
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2:20-3:20 |
Break and Browse Exhibits
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Automation
St. George AB |
Pathology and Public Health
St. George CD |
Imaging
Staffordshire |
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3:20–4:00 |
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4:00–4:45 |
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4:45-5:00 |
Track panelists:
Q and A
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Track panelists:
Q and A
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Track panelists:
Q and A
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Adjournment for the day
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6:00-8:00pm |
EXHIBITOR DEMONSTRATIONS
Staffordshire and St. George Rooms Schedule TBD |
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| 7:30-8:00 | Breakfast | ||
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Wednesday Plenary Sessions
Staffordshire
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8:00–8:45 |
Political and Strategic Aspects of Employing Digital Pathology in Pathology Departments
Dr. John Pfeifer
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8:45-9:30 |
Informatics, Imaging and the Future of the Pathlogy Department
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9:30–10:00 |
Break and Browse Exhibits
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9:30–10:00 |
Future of Pathology Informatics – The Informatics Rich Pathology Department Model
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10:45-11:30 |
Future of Pathology Informatics – The Biomedical Department Model
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11:30-12:00 |
Conference Recap, Summary and Awards
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Conference Adjournment
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